"Any religious argument is based on one peice of literature that was written 2000 years ago," unless you're buddist, hindu, taoist, mormon, etc. you have a beef with christians, say it.
"has been debunked on several occasions (universe revolving around earth?)" correction, the official church doctrine has been debunked several times, not what the Bible said, and in your example, the bible never claimed universe revolving around earth. sorry.
"and is completely baseless when it comes to what is reality." your own personal opinion, which is an unenlightened absolute statement, so not proof for anything.
as for what JD wrote, it is all fine and dandy, assuming human knowledge of all creatures if unfaillible, that our comprehension of the world is complete, and based on one's own opinion as to how animals should ahve been created oppose to how they are.
for example, when he spoke of eyes in animals that don't need them, and that don't work anyways, here it is assumed th were created at their origin with non functionning eyes, ignoring speciation and the fact that these creatures could very well have come from the one original created kind, and that their eyes have atrofied over time, though i don't know the process, ask an expert on speciation (micro evolution) for that answer.
also, when it cane to "waste"in fish and acorns, it assumes that if the tree or fish made only one egg instead, it would survive each time. but, fish eggs produce enough fish for the species to propagate, and enough to be part of plankton that millions of animals feed on, same goes for acrons, millions of creatures feed on these, and they fertilize the soil when decomposed, and if all acorns grew into trees, they would be a competition to the original tree, and one of the other woudl die, most likely the sapplings. so it is not a waste at all.
once again, his list assumes we fully understand each creature where this "waste" is, that we can know what is "better" for each species and waht is "wasteful", that we understand the Creator fully too, to be able to tell him where he screwed up, and the list doesn't take the whole eqautions into account each time. Main question: does it hinder the animal to have them, and how is it wasteful for them to have em? if it hinders them, then biological selection would choose these genes not.
You can't throw out what is creation and its perfection of design (DNA, just think about it) just because you think there is waste to a creature you don't understand fully. For example: there cannot be a Creating God because he created wasteful things from my point of view, like the hip bones in whales that are only superficial. The ONLY way you can verify that statement is to genetically alter a whale to ahve NO hip bones, and see if they trully are useless. I am pretty sure they give structure to the animals, and play some role we cannot fathom as observers of the animals.
another thing: people didn't know why the heck humback whales had bumps on the front part of their pectoral fins, thinking it increased drag, or that they were superfluous. But in wind tunnels, people realized that they created vortexes of flow, reducing drag and helping them turn easier. an educated guess was wrong.
that is all i have to say for that list, which is fascinating, but assuming too much of human omniscience.